8/15/2023 0 Comments Chemdoodle ion bondsKetcher: Chemical 2D data reader/writer.The Virtual Model Kit has been a source of inspiration for the birth of this project. This web application is built on top of the JavaScript libraries and online services listed below. You can use MolView to search through different scientific databases including compound databases, protein databases and spectral databases, and view records from these databases as interactive visualizations using WebGL and HTML5 technologies. The QuickLook plugin is now functioning on the latest macOS versions.MolView is an intuitive, Open-Source web-application to make science and education more awesome! MolView is mainly intended as web-based data visualization platform.Fixed issue in ICXML files where path and bezier fill states were not saved.Brown frame surrounding template additions when drawing has been removed.Flipped stereo wedge bonds are now correctly considered when updating stereochemical configurations.Corrected an issue where 2D clean didn't preserve double bond geometry if a condensed label was present.Historic IUPAC group classifications can now be displayed on the periodic table.Please see section 13.5 of the ChemDoodle User Guide for more information. Added new warnings, and warnings are now shown on bonds.Lewis dot structures now can be generated from skeleton structures containing condensed labels.Please see section 9.13.3 of the ChemDoodle User Guide for more information. This ability is off by default when creating a highlight. Highlight shapes now allow you to color in rings.On input, non-integral groups from ChemDraw are not fully compatible with the z-indexing system in ChemDoodle, so there is a new option in Files Preferences for ChemDraw files to breakup groups on input, preserving the intended z-indexing. Support for the input and output of group objects to ChemDraw CDX and CDXML files.Using shortcut keys to add chains will also look for the least congested area, like the optimize zone does. When using shortcuts to add chains, if the origin is an end of a triple bond, the angle will be made 180 degrees. Improvements to the automatic chain drawing tools. Unsupported configuration types will just be ignored, but will show a warning in the Line Notation Pad widget. Advanced parsing of all configuration types, even those not supported by ChemDoodle. Allene and cumulene configurations are now supported. Reworked and full support for advanced stereochemistry in SMILES input and output. Reaction SMILES are now read and written. Atom properties are now interpreted as best as possible if not in the correct order as defined by Daylight. Please see section 13.17 of the ChemDoodle User Guide for more information. More stereochemistry warnings are now shown, including on bonds, to check your work. Interpretation of wedge drawings is also accurate via IUPAC rules. It now works closely with the 2D layout algorithm and produces accurate wedge diagrams according to IUPAC rules, even in complex cases.
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